Pan-genome 분석 나름대로 순서 정리

(2020-04-22 edited)

Prepare nucleotide FASTA file

Go to genome database such NCBI Genome

Search the strain that you want to obtain genome

Go to FTP directory and download nucleotide FASTA file (...genomic.fna.gz)

1. Genome annotation

genome annotation이 안되어있는 경우 nucleotide fasta file을 prokka로 annotation

2.